Remove old modules (sph, Metafor, fdtd)

Since this repository is going to be frozen soon and replaced by several new ones such as amfe, dartflo, one repo to be created for heat/waves and another one for Kim's work (mirrors/katoptron/params), it is important to remove the parts that are not related to the "waves/fwk" structure from this repository.

The following folders have been removed:

• sph: moved to https://github.com/rboman/progs/tree/master/classes/sph0
• Metafor: archived with my "old scripts to be refactored"
• fdtd: moved to https://github.com/rboman/progs/tree/master/classes/fdtd

Metafor/Mparams/Metafor_call.py

-#!/usr/bin/env python3
-# -*- coding: utf-8; -*-
-
-# Copyright 2020 University of Liège
-# 
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-# 
-#     http://www.apache.org/licenses/LICENSE-2.0
-# 
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-
-
-
-import numpy as np
-import os
-import shutil
-
-import fwk
-
-isUnix = lambda: os.name == 'posix'
-
-def Metafor_call(d):
-    import shlex, subprocess
-    import platform
-    command_line = d['Metafor_exe'] + ' -nogui'
-    print(command_line)
-    args = shlex.split(command_line)
-
-    fileout = open('Metafor.log','w')
-
-    workdir = os.getcwd()
-
-    if isUnix(): # sans close_fds, ca freeze
-        if platform.system() == 'Darwin':
-            my_env = os.environ.copy()
-            my_env["DYLD_LIBRARY_PATH"] = my_env.get("VTK_DIR", '')
-            p = subprocess.Popen(args, stdin=subprocess.PIPE, stdout=fileout, stderr=fileout, env=my_env, shell=False,close_fds=True)
-        else:
-            p = subprocess.Popen(args, stdin=subprocess.PIPE, stdout=fileout, stderr=fileout, env=os.environ, shell=False,close_fds=True)
-    else: # si nice+Windows => "shell=True" (pour "start")
-        p = subprocess.Popen(args, stdin=subprocess.PIPE, stdout=fileout, stderr=fileout, env=os.environ, shell=True)
-
-    pin = p.stdin
-    pin.write("import sys\n")
-    pin.write("sys.path.append(%s)\n" % repr(d['Metafor_model']))
-    pin.write("load(%s)\n" % repr(d['Metafor_model_name']))
-    #pin.write("setDir(%s)\n" % repr(workdir))
-    pin.write("para = %s\n" % repr(d))
-    pin.write("instance(para)\n" )
-    pin.write("meta()\n")
-    pin.close()
-
-    retcode = p.wait()
-
-    fileout.close()
-
-    '''
-    print os.path.isfile('pars.py')
-    print os.path.isfile('Metafor.log')
-    print 'workspace/' + d['Metafor_model_name'] + '/time.ascii'
-    print os.path.isfile('workspace/' + d['Metafor_model_name'] + '/time.ascii')
-    '''
-
-    src = workdir + '/workspace/' + d['Metafor_model_name']
-
-    src_files = os.listdir(src)
-    for file_name in src_files:
-        full_file_name = os.path.join(src, file_name)
-        if os.path.isfile(full_file_name):
-            shutil.copy(full_file_name, workdir)
-
-    shutil.rmtree(workdir + '/workspace')