config pbs

parametricJob.py

@@ -563,8 +563,11 @@ class ParametricJob(PRMSet):
         #file.write("#PBS -l model=%s\n"%self.pars['MODEL'].val) #allow choice for subqueues => chose CPU Type 
                                                                  #allowed values : westemere / westmere_fat / westmere_xfat / ivyBridge             
         # workdir : 
-        #file.write("echo '------------------ Work dir --------------------'\n")
-        #file.write("cd ${PBS_O_WORKDIR} && echo ${PBS_O_WORKDIR}\n")
+        file.write("echo '------------------ Work dir --------------------'\n")
+        #pbs does not start in launchworkdir => get back to it
+        file.write("cd ${PBS_O_WORKDIR} && echo ${PBS_O_WORKDIR}\n")
+        #pbs output only written at the end of exec. This command allow having output during run
+        file.write("exec > ${PBS_O_WORKDIR}/${PBS_JOBNAME}_${PBS_JOBID}.log\n") 
         file.write("echo '------------------ Job Info --------------------'\n")
         # print info         
         file.write("echo 'jobid      : $PBS_JOBID'\n")