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Commit 54e38214 authored by Beliy Nikita's avatar Beliy Nikita
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added map for ru without plugins

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Options:
version: 2.3.1
bidsignore: []
PlugIns:
path: ~
options: {}
MRI:
Nifti_SPM12:
__ignore__:
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/001-localizer/s1904-0001-00001-000001-01.nii
checked: true
suffix: ''
attributes:
ProtocolName: 'localizer'
bids: !!omap []
json: !!omap []
func:
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/002-cmrr_mbep2d_bold_mb2_invertpe/f1904-0002-00001-000001-01.nii
example: func/sub-003_ses-HCL_task-nBack_dir-PA_run-1_bold
checked: true
suffix: bold
attributes:
ProtocolName: cmrr_mbep2d_bold_mb2_invertpe
ImageType: ORIGINAL\\PRIMARY\\M\\MB\\ND\\MOSAIC
SeriesNumber: 2
bids: !!omap
- dir: PA
- task: nBack
- acq: ~
- ce: ~
- rec: ~
- run: <AcquisitionNumber>
- echo: ~
json: !!omap
- TaskName: <<bids:task>>
- Instructions: ""
- TaskDescription: ""
- CogAtlasID: ""
- CogPOID: ""
- RepetitionTime: <time3:RepetitionTime>
- NumberOfVolumesDiscardedByScanner: ""
- NumberOfVolumesDiscardedByUser: ""
- DelayTime: 0
- DelayAfterTrigger: ""
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/006-cmrr_mbep2d_bold_mb2_invertpe/f1904-0006-00001-000001-01.nii
example: func/sub-003_ses-HCL_task-rest_dir-PA_run-1_bold
checked: true
suffix: bold
attributes:
ProtocolName: cmrr_mbep2d_bold_mb2_invertpe
ImageType: ORIGINAL\\PRIMARY\\M\\MB\\ND\\MOSAIC
SeriesNumber: 6
bids: !!omap
- dir: PA
- task: rest
- acq: ~
- ce: ~
- rec: ~
- run: <AcquisitionNumber>
- echo: ~
json: !!omap
- TaskName: <<bids:task>>
- Instructions: ""
- TaskDescription: ""
- CogAtlasID: ""
- CogPOID: ""
- RepetitionTime: <time3:RepetitionTime>
- NumberOfVolumesDiscardedByScanner: ""
- NumberOfVolumesDiscardedByUser: ""
- DelayTime: 0
- DelayAfterTrigger: ""
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/004-cmrr_mbep2d_bold_mb2_task_fat/f1904-0004-00001-000001-01.nii
example: func/sub-003_ses-HCL_task-nBack_dir-AP_run-1_bold
checked: true
suffix: bold
attributes:
ProtocolName: cmrr_mbep2d_bold_mb2_task_fat
ImageType: ORIGINAL\\PRIMARY\\M\\MB\\ND\\MOSAIC
bids: !!omap
- dir: AP
- task: nBack
- acq: ~
- ce: ~
- rec: ~
- run: <AcquisitionNumber>
- echo: ~
json: !!omap
- TaskName: <<bids:task>>
- Instructions: ""
- TaskDescription: ""
- CogAtlasID: ""
- CogPOID: ""
- RepetitionTime: <time3:RepetitionTime>
- NumberOfVolumesDiscardedByScanner: ""
- NumberOfVolumesDiscardedByUser: ""
- DelayTime: 0
- DelayAfterTrigger: ""
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/008-cmrr_mbep2d_bold_mb2_rest/f1904-0008-00001-000001-01.nii
example: func/sub-003_ses-HCL_task-rest_dir-AP_run-1_bold
checked: true
suffix: bold
attributes:
ProtocolName: cmrr_mbep2d_bold_mb2_rest
ImageType: ORIGINAL\\PRIMARY\\M\\MB\\ND\\MOSAIC
bids: !!omap
- dir: AP
- task: rest
- acq: ~
- ce: ~
- rec: ~
- run: <AcquisitionNumber>
- echo: ~
json: !!omap
- TaskName: <<bids:task>>
- Instructions: ""
- TaskDescription: ""
- CogAtlasID: ""
- CogPOID: ""
- RepetitionTime: <time3:RepetitionTime>
- NumberOfVolumesDiscardedByScanner: ""
- NumberOfVolumesDiscardedByUser: ""
- DelayTime: 0
- DelayAfterTrigger: ""
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-LCL/MRI/004-cmrr_mbep2d_bold_mb2_task_nfat/f1894-0004-00001-000001-01.nii
example: func/sub-003_ses-LCL_task-nBack_dir-AP_run-1_bold
checked: true
suffix: bold
attributes:
ProtocolName: cmrr_mbep2d_bold_mb2_task_nfat
ImageType: ORIGINAL\\PRIMARY\\M\\MB\\ND\\MOSAIC
bids: !!omap
- dir: AP
- task: nBack
- acq: ~
- ce: ~
- rec: ~
- run: <AcquisitionNumber>
- echo: ~
json: !!omap
- TaskName: <<bids:task>>
- Instructions: ""
- TaskDescription: ""
- CogAtlasID: ""
- CogPOID: ""
- RepetitionTime: <time3:RepetitionTime>
- NumberOfVolumesDiscardedByScanner: ""
- NumberOfVolumesDiscardedByUser: ""
- DelayTime: 0
- DelayAfterTrigger: ""
fmap:
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/010-gre_field_mapping/s1904-0010-00001-000001-01.nii
example: fmap/sub-003_ses-HCL_magnitude1
checked: true
suffix: magnitude<EchoNumbers>
attributes:
ProtocolName: 'gre_field_mapping'
ImageType: 'ORIGINAL\\PRIMARY\\M\\ND'
SeriesNumber: 10
bids: !!omap
- acq: ~
- ce: ~
- dir: ~
- run: ~
json: !!omap
- EchoTime: <time3:EchoTime>
- IntendedFor:
- "func/<<subject>>_<<session>>_task-nBack_bold.nii"
- "func/<<subject>>_<<session>>_task-rest_bold.nii"
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/015-gre_field_mapping/s1905-0015-00001-000001-01.nii
example: fmap/sub-003_ses-STROOP_magnitude1
checked: true
suffix: magnitude<EchoNumbers>
attributes:
ProtocolName: 'gre_field_mapping'
ImageType: 'ORIGINAL\\PRIMARY\\M\\ND'
SeriesNumber: 15
bids: !!omap
- acq: ~
- ce: ~
- dir: ~
- run: ~
json: !!omap
- EchoTime: <time3:EchoTime>
- IntendedFor:
- "anat/<<subject>>_<<session>>_acq-PDw_echo-*_MPM.nii"
- "anat/<<subject>>_<<session>>_acq-MTw_echo-*_MPM.nii"
- "anat/<<subject>>_<<session>>_acq-T1w_echo-*_MPM.nii"
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/011-gre_field_mapping/s1904-0011-00001-000001-02.nii
example: fmap/sub-003_ses-HCL_phasediff
checked: true
suffix: phasediff
attributes:
ProtocolName: 'gre_field_mapping'
ImageType: 'ORIGINAL\\PRIMARY\\P\\ND'
SeriesNumber: 11
bids: !!omap
- acq: ~
- ce: ~
- dir: ~
- run: ~
json: !!omap
- EchoTime: ~
- EchoTime1: <time6:CSASeriesHeaderInfo/MrPhoenixProtocol/alTE/0>
- EchoTime2: <time6:CSASeriesHeaderInfo/MrPhoenixProtocol/alTE/1>
- IntendedFor:
- "func/<<subject>>_<<session>>_task-nBack_bold.nii"
- "func/<<subject>>_<<session>>_task-rest_bold.nii"
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/016-gre_field_mapping/s1905-0016-00001-000001-02.nii
example: fmap/sub-003_ses-STROOP_phasediff
checked: true
suffix: phasediff
attributes:
ProtocolName: 'gre_field_mapping'
ImageType: 'ORIGINAL\\PRIMARY\\P\\ND'
SeriesNumber: 16
bids: !!omap
- acq: ~
- ce: ~
- dir: ~
- run: ~
json: !!omap
- EchoTime: ~
- EchoTime1: <time6:CSASeriesHeaderInfo/MrPhoenixProtocol/alTE/0>
- EchoTime2: <time6:CSASeriesHeaderInfo/MrPhoenixProtocol/alTE/1>
- IntendedFor:
- "anat/<<subject>>_<<session>>_acq-PDw_echo-*_MPM.nii"
- "anat/<<subject>>_<<session>>_acq-MTw_echo-*_MPM.nii"
- "anat/<<subject>>_<<session>>_acq-T1w_echo-*_MPM.nii"
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/002-al_mtflash3d_sensArray/s1905-0002-00001-000032-01.nii
example: fmap/sub-003_ses-STROOP_acq-HeadPDw_B1minus
checked: true
suffix: B1minus
attributes:
ProtocolName: 'al_mtflash3d_sensArray'
SeriesNumber: 2
bids: !!omap
- acq: HeadPDw
- mod: ~
json: !!omap
- EchoTime: <time3:EchoTime>
- IntendedFor:
- "anat/<<subject>>_<<session>>_acq-<<bids:mod>>_echo-*_MPM.nii"
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/003-al_mtflash3d_sensBody/s1905-0003-00001-000032-01.nii
example: fmap/sub-003_ses-STROOP_acq-BodyPDw_B1minus
checked: true
suffix: B1minus
attributes:
ProtocolName: 'al_mtflash3d_sensBody'
SeriesNumber: 3
bids: !!omap
- acq: BodyPDw
- mod: ~
json: !!omap
- EchoTime: <time3:EchoTime>
- IntendedFor:
- "anat/<<subject>>_<<session>>_acq-<<bids:mod>>_echo-*_MPM.nii"
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/014-al_B1mapping/s1905-0014-00001-000001-01.nii
example: fmap/sub-003_ses-STROOP_echo-1_fa-1_B1plus
checked: true
suffix: B1plus
attributes:
ProtocolName: 'al_B1mapping'
bids: !!omap
- echo: <EchoNumbers>
- fa: <AcquisitionNumber>
json: !!omap
- EchoTime: <time3:EchoTime>
- B1mapNominalFAValues: <B1mapNominalFAValues>
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/006-al_mtflash3d_sensArray/s1905-0006-00001-000032-01.nii
example: fmap/sub-003_ses-STROOP_acq-HeadT1w_B1minus
checked: true
suffix: B1minus
attributes:
ProtocolName: 'al_mtflash3d_sensArray'
SeriesNumber: 6
bids: !!omap
- acq: HeadT1w
- mod: ~
json: !!omap
- EchoTime: <time3:EchoTime>
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/007-al_mtflash3d_sensBody/s1905-0007-00001-000032-01.nii
example: fmap/sub-003_ses-STROOP_acq-BodyT1w_B1minus
checked: true
suffix: B1minus
attributes:
ProtocolName: 'al_mtflash3d_sensBody'
SeriesNumber: 7
bids: !!omap
- acq: BodyT1w
- mod: ~
json: !!omap
- IntendedFor:
- "anat/<<subject>>_<<session>>_acq-<<bids:mod>>_echo-*_MPM.nii"
- EchoTime: <time3:EchoTime>
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/010-al_mtflash3d_sensArray/s1905-0010-00001-000032-01.nii
example: fmap/sub-003_ses-STROOP_acq-HeadMTw_B1minus
checked: true
suffix: B1minus
attributes:
ProtocolName: 'al_mtflash3d_sensArray'
SeriesNumber: 10
bids: !!omap
- acq: HeadMTw
- mod: ~
json: !!omap
- IntendedFor:
- "anat/<<subject>>_<<session>>_acq-<<bids:mod>>_echo-*_MPM.nii"
- EchoTime: <time3:EchoTime>
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/011-al_mtflash3d_sensBody/s1905-0011-00001-000032-01.nii
example: fmap/sub-003_ses-STROOP_acq-BodyMTw_B1minus
checked: true
suffix: B1minus
attributes:
ProtocolName: 'al_mtflash3d_sensBody'
SeriesNumber: 11
bids: !!omap
- acq: BodyMTw
- mod: ~
json: !!omap
- IntendedFor:
- "anat/<<subject>>_<<session>>_acq-<<bids:mod>>_echo-*_MPM.nii"
- EchoTime: <time3:EchoTime>
dwi:
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/012-cmrr_mbep2d_diff_NODDI_invertpe/s1904-0012-00001-000001-01.nii
example: dwi/sub-003_ses-HCL_acq-RF_dir-PA_run-1_dwi
checked: true
suffix: dwi
attributes:
ProtocolName: cmrr_mbep2d_diff_NODDI_invertpe
bids: !!omap
- dir: PA
- acq: RF
- run: <AcquisitionNumber>
json: !!omap []
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/013-cmrr_mbep2d_diff_NODDI/f1904-0013-00001-000001-01.nii
example: dwi/sub-003_ses-HCL_acq-RF_dir-AP_run-1_dwi
checked: true
suffix: dwi
attributes:
ProtocolName: cmrr_mbep2d_diff_NODDI
bids: !!omap
- dir: AP
- acq: RF
- run: <AcquisitionNumber>
json: !!omap []
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-HCL/MRI/014-cmrr_mbep2d_diff_NODDI_noise/s1904-0014-00001-000001-01.nii
example: dwi/sub-003_ses-HCL_acq-noRF_dir-AP_run-1_dwi
checked: true
suffix: dwi
attributes:
ProtocolName: cmrr_mbep2d_diff_NODDI_noise
bids: !!omap
- dir: AP
- acq: noRF
- run: <AcquisitionNumber>
json: !!omap []
anat:
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-LCL/MRI/012-t1_mpr_sag_p2_iso/s1894-0012-00001-000224-01.nii
example: anat/sub-003_ses-LCL_T1w
checked: true
suffix: T1w
attributes:
ProtocolName: t1_mpr_sag_p2_iso
bids: !!omap
- acq: ~
- ce: ~
- rec: ~
- run: ~
- mod: ~
json: !!omap
- ContrastBolusIngredient: ~
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-LCL/MRI/013-t2_spc_da-fl_sag_p2_iso/s1894-0013-00001-000192-01.nii
example: anat/sub-003_ses-LCL_FLAIR
checked: true
suffix: FLAIR
attributes:
ProtocolName: 't2_spc_da-fl_sag_p2_iso'
bids: !!omap
- acq: ~
- ce: ~
- rec: ~
- run: ~
- mod: ~
json: !!omap
- ContrastBolusIngredient: ~
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/004-al_mtflash3d_PDw/s1905-0004-00001-000176-01.nii
example: anat/sub-003_ses-STROOP_acq-PDw_part-mag_echo-1_MPM
checked: true
suffix: MPM
attributes:
ProtocolName: 'al_mtflash3d_PDw'
ImageType: 'ORIGINAL\\PRIMARY\\M\\ND'
bids: !!omap
- acq: PDw
- ce: ~
- rec: ~
- part: mag
- run: ~
- echo: <EchoNumbers>
- mod: ~
json: !!omap
- MTState: "Off"
- ContrastBolusIngredient: ~
- EchoTime: <time3:EchoTime>
- RepetitionTime: <time3:RepetitionTime>
- FlipAngle: <FlipAngle>
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/008-al_mtflash3d_T1w/s1905-0008-00001-000176-01.nii
example: anat/sub-003_ses-STROOP_acq-T1w_part-mag_echo-1_MPM
checked: true
suffix: MPM
attributes:
ProtocolName: al_mtflash3d_T1w
ImageType: 'ORIGINAL\\PRIMARY\\M\\ND'
bids: !!omap
- acq: T1w
- part: mag
- ce: ~
- rec: ~
- run: ~
- mod: ~
- echo: <EchoNumbers>
json: !!omap
- ContrastBolusIngredient: ~
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/012-al_mtflash3d_MTw/s1905-0012-00001-000176-01.nii
example: anat/sub-003_ses-STROOP_acq-MTw_part-mag_echo-1_MPM
checked: true
suffix: MPM
attributes:
ProtocolName: 'al_mtflash3d_MTw'
ImageType: 'ORIGINAL\\PRIMARY\\M\\ND'
bids: !!omap
- acq: MTw
- ce: ~
- rec: ~
- part: mag
- run: ~
- echo: <EchoNumbers>
- mod: ~
json: !!omap
- MTState: "On"
- ContrastBolusIngredient: ~
- EchoTime: <time3:EchoTime>
- RepetitionTime: <time3:RepetitionTime>
- FlipAngle: <FlipAngle>
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/005-al_mtflash3d_PDw/s1905-0005-00001-000176-01.nii
example: anat/sub-003_ses-STROOP_acq-PDw_part-phase_echo-1_MPM
checked: true
suffix: MPM
attributes:
ProtocolName: 'al_mtflash3d_PDw'
ImageType: 'ORIGINAL\\PRIMARY\\P\\ND'
bids: !!omap
- acq: PDw
- ce: ~
- rec: ~
- part: phase
- run: ~
- echo: <EchoNumbers>
- mod: ~
json: !!omap
- MTState: "Off"
- ContrastBolusIngredient: ~
- EchoTime: <time3:EchoTime>
- RepetitionTime: <time3:RepetitionTime>
- FlipAngle: <FlipAngle>
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/009-al_mtflash3d_T1w/s1905-0009-00001-000176-01.nii
example: anat/sub-003_ses-STROOP_acq-T1w_part-phase_echo-1_T1w
checked: true
suffix: MPM
attributes:
ProtocolName: al_mtflash3d_T1w
ImageType: 'ORIGINAL\\PRIMARY\\P\\ND'
bids: !!omap
- acq: T1w
- part: phase
- ce: ~
- rec: ~
- run: ~
- mod: ~
- echo: <EchoNumbers>
json: !!omap
- ContrastBolusIngredient: ~
- provenance: /home/beliy/Works/bidscoin/test/renamed/sub-003/ses-STROOP/MRI/013-al_mtflash3d_MTw/s1905-0013-00001-000176-01.nii
example: anat/sub-003_ses-STROOP_acq-MTw_part-phase_echo-1_MPM
checked: true
suffix: MPM
attributes:
ProtocolName: 'al_mtflash3d_MTw'
ImageType: 'ORIGINAL\\PRIMARY\\P\\ND'
bids: !!omap
- acq: MTw
- ce: ~
- rec: ~
- part: phase
- run: ~
- echo: <EchoNumbers>
- mod: ~
json: !!omap
- MTState: "On"
- ContrastBolusIngredient: ~
- EchoTime: <time3:EchoTime>
- RepetitionTime: <time3:RepetitionTime>
- FlipAngle: <FlipAngle>
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