build_linux.md

-## Linux
-Note that these build instructions are using the GNU compilers but Intel's compiler can be used as well.
-
-**Required packages**  
-```bash
-# Common
-sudo apt update
-sudo apt install git
-sudo apt install build-essential cmake
-sudo apt install swig
-sudo apt install libeigen3-dev
-sudo apt install gmsh
-# Python 3
-sudo apt install python3-dev python3-numpy python3-scipy
-```
-**Optional packages**
-```bash
-# CoDiPack
-git clone https://github.com/SciCompKL/CoDiPack.git
-export INCLUDE=${INCLUDE}:/path/to/codipack/include
-# VTK
-sudo apt install python3-vtk9
-# Documentation
-sudo apt install doxygen
-sudo apt install graphviz
-```
-**Build**
-```bash
-# Get the code
-git lfs install # enable large file support
-git clone git@gitlab.uliege.be:am-dept/sdpm.git # ssh only
-cd sdpm
-# Build
-mkdir build && cd build
-cmake ..
-make [-j4]
-[make install] # to install
-[make dox] # to build the documentation
-# Test
-ctest [-E exclude_pattern] [-R include_pattern] [-j4]
-```
-For a complete list of options, refer to the [build](Build) page.  
-
-**Example**  
-From the SDPM root directory,
-```bash
-python run.py sdpm/tests/lann.py
+## Linux
+Note that these build instructions are using the GNU compilers but Intel's compiler can be used as well.
+
+**Required packages**  
+```bash
+# Common
+sudo apt update
+sudo apt install git
+sudo apt install build-essential cmake
+sudo apt install swig
+sudo apt install libeigen3-dev
+# Python 3
+sudo apt install python3-dev
+python3 -m pip install numpy scipy matplotlib voluptuous
+# Gmsh
+python3 -m pip install gmsh
+```
+**Optional packages**
+```bash
+# CoDiPack
+git clone https://github.com/SciCompKL/CoDiPack.git
+export INCLUDE=${INCLUDE}:/path/to/codipack/include
+# VTK
+sudo apt install python3-vtk9
+python3 -m pip install vtk
+# Documentation
+sudo apt install doxygen graphviz
+```
+**Build**
+```bash
+# Get the code
+git lfs install # enable large file support
+git clone git@gitlab.uliege.be:am-dept/sdpm.git # ssh only for developers
+cd sdpm
+# Build
+mkdir build && cd build
+cmake ..
+make [-j4]
+[make dox] # to build the documentation
+# Test
+ctest [-E exclude_pattern] [-R include_pattern] [-j4]
+# Install
+python3 -m pip install . [--user]
+```
+For a complete list of options, refer to the [build](Build) page.  
+
+**Example**  
+From the SDPM root directory,
+```bash
+python run.py sdpm/tests/lann.py [-v] [--nogui]
+```
+From anywhere, if the Python package has been installed,
+```bash
+sdpm-run your_example.py [-v] [--nogui]
 ```
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