[0KRunning with gitlab-runner 17.3.1 (66269445)[0;m
[0K on vaillant 9gMCJBcQ, system ID: s_75723125eadd[0;m
[0K[36;1mResolving secrets[0;m[0;m
section_start:1725524528:prepare_executor
[0K[0K[36;1mPreparing the "docker" executor[0;m[0;m
[0KUsing Docker executor with image rboman/waves-py3:latest ...[0;m
[0KPulling docker image rboman/waves-py3:latest ...[0;m
[0KUsing docker image sha256:8f9839f49d7ff7e9b9d431fc1e3fd1694c885e83e2ce167b66f5a145555f3863 for rboman/waves-py3:latest with digest rboman/waves-py3@sha256:eca97bd22fed99d331d855a1b8321cea567cc4155f2746f26be35bdff0b3a40d ...[0;m
section_end:1725524530:prepare_executor
[0Ksection_start:1725524530:prepare_script
[0K[0K[36;1mPreparing environment[0;m[0;m
Running on runner-9gmcjbcq-project-2918-concurrent-0 via vaillant...
section_end:1725524531:prepare_script
[0Ksection_start:1725524531:get_sources
[0K[0K[36;1mGetting source from Git repository[0;m[0;m
[32;1mFetching changes with git depth set to 20...[0;m
Initialized empty Git repository in /builds/am-dept/amfe-solvers/.git/
[32;1mCreated fresh repository.[0;m
[32;1mChecking out 03a97500 as detached HEAD (ref is main)...[0;m
[32;1mUpdating/initializing submodules recursively with git depth set to 20...[0;m
Submodule 'ext/amfe' (https://gitlab-ci-token:[MASKED]@gitlab.uliege.be/am-dept/amfe.git) registered for path 'ext/amfe'
Synchronizing submodule url for 'ext/amfe'
Cloning into '/builds/am-dept/amfe-solvers/ext/amfe'...
Submodule path 'ext/amfe': checked out '9d4ad324c7ba732d70b6f08c50030c83252a8e09'
[32;1mUpdated submodules[0;m
Synchronizing submodule url for 'ext/amfe'
Entering 'ext/amfe'
section_end:1725524533:get_sources
[0Ksection_start:1725524533:step_script
[0K[0K[36;1mExecuting "step_script" stage of the job script[0;m[0;m
[0KUsing docker image sha256:8f9839f49d7ff7e9b9d431fc1e3fd1694c885e83e2ce167b66f5a145555f3863 for rboman/waves-py3:latest with digest rboman/waves-py3@sha256:eca97bd22fed99d331d855a1b8321cea567cc4155f2746f26be35bdff0b3a40d ...[0;m
[32;1m$ source /opt/intel/oneapi/mkl/latest/env/vars.sh[0;m
[32;1m$ source /opt/intel/oneapi/tbb/latest/env/vars.sh[0;m
[32;1m$ echo $(nproc)[0;m
64
[32;1m$ printenv | sort[0;m
CI=true
CI_API_GRAPHQL_URL=https://gitlab.uliege.be/api/graphql
CI_API_V4_URL=https://gitlab.uliege.be/api/v4
CI_BUILDS_DIR=/builds
CI_COMMIT_AUTHOR=Boman Romain <r.boman@uliege.be>
CI_COMMIT_BEFORE_SHA=459b9997b500952b8e40c9551cccf9ca34e10541
CI_COMMIT_BRANCH=main
CI_COMMIT_DESCRIPTION=
CI_COMMIT_MESSAGE=Merge branch 'boman' into 'main'
CI_COMMIT_REF_NAME=main
CI_COMMIT_REF_PROTECTED=true
CI_COMMIT_REF_SLUG=main
CI_COMMIT_SHA=03a97500714ea78f4d650d512617eaf6c071f2c9
CI_COMMIT_SHORT_SHA=03a97500
CI_COMMIT_TIMESTAMP=2024-09-05T08:22:04+00:00
CI_COMMIT_TITLE=Merge branch 'boman' into 'main'
CI_CONCURRENT_ID=0
CI_CONCURRENT_PROJECT_ID=0
CI_CONFIG_PATH=.gitlab-ci.yml
CI_DEFAULT_BRANCH=main
CI_DEPENDENCY_PROXY_DIRECT_GROUP_IMAGE_PREFIX=gitlab.uliege.be:443/am-dept/dependency_proxy/containers
CI_DEPENDENCY_PROXY_GROUP_IMAGE_PREFIX=gitlab.uliege.be:443/am-dept/dependency_proxy/containers
CI_DEPENDENCY_PROXY_PASSWORD=[MASKED]
CI_DEPENDENCY_PROXY_SERVER=gitlab.uliege.be:443
CI_DEPENDENCY_PROXY_USER=gitlab-ci-token
CI_DISPOSABLE_ENVIRONMENT=true
CI_JOB_ID=145474
CI_JOB_IMAGE=rboman/waves-py3:latest
CI_JOB_NAME=format
CI_JOB_NAME_SLUG=format
CI_JOB_STAGE=build
CI_JOB_STARTED_AT=2024-09-05T08:22:07Z
CI_JOB_STATUS=running
CI_JOB_TIMEOUT=3600
CI_JOB_TOKEN=[MASKED]
CI_JOB_URL=https://gitlab.uliege.be/am-dept/amfe-solvers/-/jobs/145474
CI_NODE_TOTAL=1
CI_PAGES_DOMAIN=gitlabpages.uliege.be
CI_PAGES_URL=https://am-dept.gitlabpages.uliege.be/amfe-solvers
CI_PIPELINE_CREATED_AT=2024-09-05T08:22:05Z
CI_PIPELINE_ID=44989
CI_PIPELINE_IID=17
CI_PIPELINE_NAME=
CI_PIPELINE_SOURCE=push
CI_PIPELINE_URL=https://gitlab.uliege.be/am-dept/amfe-solvers/-/pipelines/44989
CI_PROJECT_CLASSIFICATION_LABEL=
CI_PROJECT_DESCRIPTION=Example of FE solvers using the amfe library
CI_PROJECT_DIR=/builds/am-dept/amfe-solvers
CI_PROJECT_ID=2918
CI_PROJECT_NAME=amfe-solvers
CI_PROJECT_NAMESPACE=am-dept
CI_PROJECT_NAMESPACE_ID=59
CI_PROJECT_PATH=am-dept/amfe-solvers
CI_PROJECT_PATH_SLUG=am-dept-amfe-solvers
CI_PROJECT_REPOSITORY_LANGUAGES=python,c++,glsl,cmake,swig
CI_PROJECT_ROOT_NAMESPACE=am-dept
CI_PROJECT_TITLE=amfe-solvers
CI_PROJECT_URL=https://gitlab.uliege.be/am-dept/amfe-solvers
CI_PROJECT_VISIBILITY=public
CI_REGISTRY=gitlab.uliege.be:5050
CI_REGISTRY_IMAGE=gitlab.uliege.be:5050/am-dept/amfe-solvers
CI_REGISTRY_PASSWORD=[MASKED]
CI_REGISTRY_USER=gitlab-ci-token
CI_REPOSITORY_URL=https://gitlab-ci-token:[MASKED]@gitlab.uliege.be/am-dept/amfe-solvers.git
CI_RUNNER_DESCRIPTION=vaillant
CI_RUNNER_EXECUTABLE_ARCH=linux/amd64
CI_RUNNER_ID=30
CI_RUNNER_REVISION=66269445
CI_RUNNER_SHORT_TOKEN=9gMCJBcQ
CI_RUNNER_TAGS=["vaillant", "mn2l"]
CI_RUNNER_VERSION=17.3.1
CI_SERVER=yes
CI_SERVER_FQDN=gitlab.uliege.be
CI_SERVER_HOST=gitlab.uliege.be
CI_SERVER_NAME=GitLab
CI_SERVER_PORT=443
CI_SERVER_PROTOCOL=https
CI_SERVER_REVISION=df01858216e
CI_SERVER_SHELL_SSH_HOST=gitlab.uliege.be
CI_SERVER_SHELL_SSH_PORT=22
CI_SERVER_TLS_CA_FILE=/builds/am-dept/amfe-solvers.tmp/CI_SERVER_TLS_CA_FILE
CI_SERVER_URL=https://gitlab.uliege.be
CI_SERVER_VERSION=17.3.1-ee
CI_SERVER_VERSION_MAJOR=17
CI_SERVER_VERSION_MINOR=3
CI_SERVER_VERSION_PATCH=1
CI_TEMPLATE_REGISTRY_HOST=registry.gitlab.com
CMAKE_PREFIX_PATH=/opt/intel/oneapi/tbb/2021.13/env/..:/opt/intel/oneapi/mkl/2024.2/lib/cmake:
CPATH=/opt/intel/oneapi/tbb/2021.13/env/../include:/opt/intel/oneapi/mkl/2024.2/include:
DEBIAN_FRONTEND=noninteractive
FF_CLEAN_UP_FAILED_CACHE_EXTRACT=false
FF_DISABLE_AUTOMATIC_TOKEN_ROTATION=false
FF_DISABLE_POWERSHELL_STDIN=false
FF_DISABLE_UMASK_FOR_DOCKER_EXECUTOR=false
FF_DISABLE_UMASK_FOR_KUBERNETES_EXECUTOR=false
FF_ENABLE_BASH_EXIT_CODE_CHECK=false
FF_ENABLE_JOB_CLEANUP=false
FF_KUBERNETES_HONOR_ENTRYPOINT=false
FF_LOG_IMAGES_CONFIGURED_FOR_JOB=false
FF_NETWORK_PER_BUILD=false
FF_POSIXLY_CORRECT_ESCAPES=false
FF_PRINT_POD_EVENTS=false
FF_RESOLVE_FULL_TLS_CHAIN=false
FF_RETRIEVE_POD_WARNING_EVENTS=true
FF_SCRIPT_SECTIONS=false
FF_SECRET_RESOLVING_FAILS_IF_MISSING=true
FF_SET_PERMISSIONS_BEFORE_CLEANUP=true
FF_SKIP_NOOP_BUILD_STAGES=true
FF_TEST_FEATURE=false
FF_TIMESTAMPS=false
FF_USE_ADVANCED_POD_SPEC_CONFIGURATION=false
FF_USE_DIRECT_DOWNLOAD=true
FF_USE_DOCKER_AUTOSCALER_DIAL_STDIO=true
FF_USE_DUMB_INIT_WITH_KUBERNETES_EXECUTOR=false
FF_USE_DYNAMIC_TRACE_FORCE_SEND_INTERVAL=false
FF_USE_FASTZIP=false
FF_USE_GIT_BUNDLE_URIS=true
FF_USE_INIT_WITH_DOCKER_EXECUTOR=false
FF_USE_LEGACY_GCS_CACHE_ADAPTER=false
FF_USE_LEGACY_KUBERNETES_EXECUTION_STRATEGY=false
FF_USE_NEW_BASH_EVAL_STRATEGY=false
FF_USE_POD_ACTIVE_DEADLINE_SECONDS=true
FF_USE_POWERSHELL_PATH_RESOLVER=false
FF_USE_WINDOWS_JOB_OBJECT=false
FF_USE_WINDOWS_LEGACY_PROCESS_STRATEGY=false
GITLAB_CI=true
GITLAB_ENV=/builds/am-dept/amfe-solvers.tmp/gitlab_runner_env
GITLAB_FEATURES=audit_events,blocked_issues,board_iteration_lists,code_owners,code_review_analytics,full_codequality_report,group_activity_analytics,group_bulk_edit,issuable_default_templates,issue_weights,iterations,ldap_group_sync,merge_request_approvers,milestone_charts,multiple_issue_assignees,multiple_ldap_servers,multiple_merge_request_assignees,multiple_merge_request_reviewers,project_merge_request_analytics,protected_refs_for_users,push_rules,resource_access_token,seat_link,seat_usage_quotas,pipelines_usage_quotas,transfer_usage_quotas,product_analytics_usage_quotas,wip_limits,zoekt_code_search,blocked_work_items,description_diffs,send_emails_from_admin_area,repository_size_limit,maintenance_mode,scoped_issue_board,contribution_analytics,group_webhooks,member_lock,elastic_search,repository_mirrors,ai_chat,adjourned_deletion_for_projects_and_groups,admin_audit_log,auditor_user,blocking_merge_requests,board_assignee_lists,board_milestone_lists,ci_secrets_management,ci_pipeline_cancellation_restrictions,cluster_agents_ci_impersonation,cluster_agents_user_impersonation,cluster_deployments,code_owner_approval_required,code_suggestions,commit_committer_check,commit_committer_name_check,compliance_framework,custom_compliance_frameworks,custom_file_templates,custom_project_templates,cycle_analytics_for_groups,cycle_analytics_for_projects,db_load_balancing,default_branch_protection_restriction_in_groups,default_project_deletion_protection,delete_unconfirmed_users,dependency_proxy_for_packages,disable_name_update_for_users,disable_personal_access_tokens,domain_verification,epics,extended_audit_events,external_authorization_service_api_management,feature_flags_code_references,file_locks,geo,generic_alert_fingerprinting,git_two_factor_enforcement,group_allowed_email_domains,group_coverage_reports,group_forking_protection,group_level_compliance_dashboard,group_milestone_project_releases,group_project_templates,group_repository_analytics,group_saml,group_scoped_ci_variables,ide_schema_config,incident_metric_upload,instance_level_scim,jira_issues_integration,ldap_group_sync_filter,merge_request_performance_metrics,admin_merge_request_approvers_rules,merge_trains,metrics_reports,multiple_alert_http_integrations,multiple_approval_rules,multiple_group_issue_boards,object_storage,microsoft_group_sync,operations_dashboard,package_forwarding,pages_size_limit,pages_multiple_versions,productivity_analytics,project_aliases,protected_environments,reject_non_dco_commits,reject_unsigned_commits,remote_development,saml_group_sync,service_accounts,scoped_labels,smartcard_auth,ssh_certificates,swimlanes,target_branch_rules,type_of_work_analytics,minimal_access_role,unprotection_restrictions,ci_project_subscriptions,incident_timeline_view,oncall_schedules,escalation_policies,zentao_issues_integration,coverage_check_approval_rule,issuable_resource_links,group_protected_branches,group_level_merge_checks_setting,oidc_client_groups_claim,disable_deleting_account_for_users,disable_private_profiles,group_saved_replies,requested_changes_block_merge_request,project_saved_replies,group_ip_restriction,issues_analytics,password_complexity,group_wikis,email_additional_text,custom_file_templates_for_namespace,incident_sla,export_user_permissions,cross_project_pipelines,feature_flags_related_issues,merge_pipelines,ci_cd_projects,github_integration,ai_config_chat,ai_features,glab_ask_git_command,ai_analyze_ci_job_failure,ai_agents,ai_review_mr,api_discovery,api_fuzzing,auto_rollback,breach_and_attack_simulation,cluster_image_scanning,external_status_checks,combined_project_analytics_dashboards,compliance_pipeline_configuration,container_scanning,credentials_inventory,custom_roles,dast,dependency_scanning,dora4_analytics,epic_colors,enterprise_templates,environment_alerts,evaluate_group_level_compliance_pipeline,explain_code,external_audit_events,experimental_features,generate_description,generate_commit_message,generate_test_file,ai_generate_cube_query,git_abuse_rate_limit,group_ci_cd_analytics,group_level_compliance_adherence_report,group_level_compliance_violations_report,group_level_analytics_dashboard,incident_management,inline_codequality,insights,issuable_health_status,issues_completed_analytics,jira_vulnerabilities_integration,jira_issue_association_enforcement,kubernetes_cluster_vulnerabilities,license_scanning,okrs,personal_access_token_expiration_policy,pre_receive_secret_detection,product_analytics,project_quality_summary,project_level_analytics_dashboard,prometheus_alerts,quality_management,related_epics,release_evidence_test_artifacts,report_approver_rules,required_ci_templates,requirements,runner_maintenance_note,runner_performance_insights,runner_performance_insights_for_namespace,runner_upgrade_management,runner_upgrade_management_for_namespace,sast,sast_advanced,sast_iac,sast_custom_rulesets,sast_fp_reduction,secret_detection,security_configuration_in_ui,security_dashboard,security_on_demand_scans,security_orchestration_policies,security_training,ssh_key_expiration_policy,summarize_mr_changes,summarize_my_mr_code_review,summarize_new_merge_request,summarize_comments,stale_runner_cleanup_for_namespace,status_page,suggested_reviewers,subepics,observability,troubleshoot_job,unique_project_download_limit,vulnerability_finding_signatures,container_scanning_for_registry,coverage_fuzzing,devops_adoption,group_level_devops_adoption,instance_level_devops_adoption
GITLAB_USER_EMAIL=r.boman@uliege.be
GITLAB_USER_ID=41
GITLAB_USER_LOGIN=rboman
GITLAB_USER_NAME=Boman Romain
GIT_LFS_SKIP_SMUDGE=1
GIT_STRATEGY=clone
GIT_SUBMODULE_STRATEGY=recursive
HOME=/root
HOSTNAME=runner-9gmcjbcq-project-2918-concurrent-0
INCLUDE=/opt/gmsh/include:/opt/mumps-4.10.0/include:
LD_LIBRARY_PATH=/opt/intel/oneapi/tbb/2021.13/env/../lib/intel64/gcc4.8:/opt/intel/oneapi/mkl/2024.2/lib:
LIB=/opt/gmsh/lib:/opt/mumps-4.10.0/lib:
LIBRARY_PATH=/opt/intel/oneapi/tbb/2021.13/env/../lib/intel64/gcc4.8:/opt/intel/oneapi/mkl/2024.2/lib/:
MKLROOT=/opt/intel/oneapi/mkl/2024.2
MKL_THREADING_LAYER=GNU
NLSPATH=/opt/intel/oneapi/mkl/2024.2/share/locale/%l_%t/%N:
OLDPWD=/
PATH=/opt/intel/oneapi/mkl/2024.2/bin/:/opt/gmsh/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
PKG_CONFIG_PATH=/opt/intel/oneapi/tbb/2021.13/env/../lib/pkgconfig:/opt/intel/oneapi/mkl/2024.2/lib/pkgconfig:
PWD=/builds/am-dept/amfe-solvers
PYTHONPATH=/opt/gmsh/bin:
RUNNER_TEMP_PROJECT_DIR=/builds/am-dept/amfe-solvers.tmp
SHLVL=1
See merge request am-dept/amfe-solvers!4
See merge request am-dept/amfe-solvers!4
TBBROOT=/opt/intel/oneapi/tbb/2021.13/env/..
_=/usr/bin/printenv
update submodule
update submodule
[32;1m$ clang-format --version[0;m
Ubuntu clang-format version 18.1.3 (1ubuntu1)
[32;1m$ ./ext/amfe/scripts/format_code.py[0;m
Traceback (most recent call last):
File "/builds/am-dept/amfe-solvers/./ext/amfe/scripts/format_code.py", line 55, in <module>
main()
File "/builds/am-dept/amfe-solvers/./ext/amfe/scripts/format_code.py", line 47, in main
retcode = subprocess.call(cmd)
^^^^^^^^^^^^^^^^^^^^
File "/usr/lib/python3.12/subprocess.py", line 389, in call
with Popen(*popenargs, **kwargs) as p:
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib/python3.12/subprocess.py", line 1026, in __init__
self._execute_child(args, executable, preexec_fn, close_fds,
File "/usr/lib/python3.12/subprocess.py", line 1955, in _execute_child
raise child_exception_type(errno_num, err_msg, err_filename)
FileNotFoundError: [Errno 2] No such file or directory: 'clang-format-14'
section_end:1725524533:step_script
[0Ksection_start:1725524533:upload_artifacts_on_failure
[0K[0K[36;1mUploading artifacts for failed job[0;m[0;m
[32;1mUploading artifacts...[0;m
[0;33mWARNING: patches/: no matching files. Ensure that the artifact path is relative to the working directory (/builds/am-dept/amfe-solvers)[0;m
[31;1mERROR: No files to upload [0;m
section_end:1725524534:upload_artifacts_on_failure
[0Ksection_start:1725524534:cleanup_file_variables
[0K[0K[36;1mCleaning up project directory and file based variables[0;m[0;m
section_end:1725524535:cleanup_file_variables
[0K[31;1mERROR: Job failed: exit code 1
[0;m